STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF69530.1Hypothetical protein. (67 aa)    
Predicted Functional Partners:
SMF69536.1
L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
       0.578
SMF69518.1
D-serine deaminase, pyridoxal phosphate-dependent.
       0.526
SMF69545.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
       0.427
Your Current Organism:
Sphingomonas indica
NCBI taxonomy Id: 941907
Other names: CCM 7882, DSM 25434, Sphingomonas indica Niharika et al. 2012, Sphingomonas sp. Dd16, strain Dd16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.