STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_09638Uncharacterized protein. (104 aa)    
Predicted Functional Partners:
TPAR_08853
tRNA-specific adenosine deaminase subunit tad3.
   
 0.919
TPAR_00308
Gamma-glutamyltransferase YwrD.
  
 
 0.722
TPAR_07747
Thymidylate synthase.
  
 
 0.707
TPAR_05175
S-methyl-5'-thioadenosine phosphorylase.
    
 0.678
TPAR_05220
Xanthine dehydrogenase.
    
 0.665
TPAR_06911
DNA-(Apurinic or apyrimidinic site) lyase 2.
   
 
 0.643
TPAR_04106
tRNA(Ile)-lysidine synthase.
  
 
 0.591
NCS6
Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation.
  
 
 0.591
TPAR_06583
Non-specific ribonucleoside hydrolase RihC.
    
 0.588
TPAR_00352
Uridine nucleosidase.
    
 0.588
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.