STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_08368Nuclear distribution protein nudE. (592 aa)    
Predicted Functional Partners:
PAC1
Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family.
    
 
 0.950
TPAR_01959
Nuclear movement protein nudC.
     
 0.817
TPAR_08342
Mitotic checkpoint protein BUB3.2.
     
 0.697
TPAR_07813
Cytoplasmic dynein 1 intermediate chain 2.
    
 
 0.677
TPAR_06925
Protein IMPACT.
    
 0.677
TPAR_02618
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
    
 0.677
TPAR_07212
Serine/threonine-protein kinase csk1.
    
 0.673
TPAR_04414
Checkpoint serine/threonine-protein kinase bub1.
    
  0.668
TPAR_05018
HORMA domain-containing protein.
     
 0.639
TPAR_02010
Ras-related protein Rab-11B.
    
  0.636
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
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