STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_06982Protein PNS1; Belongs to the CTL (choline transporter-like) family. (573 aa)    
Predicted Functional Partners:
TPAR_00548
Palmitoyl-protein thioesterase 1.
   
  
 0.545
TPAR_06906
Urea transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.531
TPAR_00878
Urea active transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.531
TPAR_06273
Very-long-chain 3-oxoacyl-CoA reductase.
   
 
  0.478
TPAR_02349
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
   
 
  0.478
TPAR_00224
Elongation of fatty acids protein.
   
 
  0.477
TPAR_02181
Protein phosphatase 2C.
 
      0.450
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
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