Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TPAR_00098 | TPAR_03558 | A0A2S4LBB3 | A0A2S4L1D7 | Peroxisomal targeting signal receptor. | Pex. | 0.981 |
TPAR_00098 | TPAR_06958 | A0A2S4LBB3 | A0A2S4KRP0 | Peroxisomal targeting signal receptor. | D-arabinitol 2-dehydrogenase [ribulose-forming]. | 0.547 |
TPAR_00098 | TPAR_07518 | A0A2S4LBB3 | A0A2S4KQ27 | Peroxisomal targeting signal receptor. | Peroxisomal hydratase-dehydrogenase-epimerase. | 0.902 |
TPAR_02366 | TPAR_04207 | A0A2S4L4R0 | A0A2S4KZH8 | Polyketide synthase. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.535 |
TPAR_02366 | TPAR_04685 | A0A2S4L4R0 | A0A2S4KY53 | Polyketide synthase. | PKS_KS domain-containing protein. | 0.845 |
TPAR_02366 | TPAR_06058 | A0A2S4L4R0 | A0A2S4KU70 | Polyketide synthase. | Polyketide synthase. | 0.855 |
TPAR_02366 | TPAR_06958 | A0A2S4L4R0 | A0A2S4KRP0 | Polyketide synthase. | D-arabinitol 2-dehydrogenase [ribulose-forming]. | 0.556 |
TPAR_02366 | TPAR_06961 | A0A2S4L4R0 | A0A2S4KRL8 | Polyketide synthase. | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.876 |
TPAR_03149 | TPAR_04207 | A0A2S4L2H5 | A0A2S4KZH8 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.975 |
TPAR_03149 | TPAR_06247 | A0A2S4L2H5 | A0A2S4KTM9 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein YmaE. | 0.983 |
TPAR_03149 | TPAR_06958 | A0A2S4L2H5 | A0A2S4KRP0 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | D-arabinitol 2-dehydrogenase [ribulose-forming]. | 0.495 |
TPAR_03149 | TPAR_07518 | A0A2S4L2H5 | A0A2S4KQ27 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Peroxisomal hydratase-dehydrogenase-epimerase. | 0.476 |
TPAR_03558 | TPAR_00098 | A0A2S4L1D7 | A0A2S4LBB3 | Pex. | Peroxisomal targeting signal receptor. | 0.981 |
TPAR_03558 | TPAR_06958 | A0A2S4L1D7 | A0A2S4KRP0 | Pex. | D-arabinitol 2-dehydrogenase [ribulose-forming]. | 0.503 |
TPAR_03558 | TPAR_07518 | A0A2S4L1D7 | A0A2S4KQ27 | Pex. | Peroxisomal hydratase-dehydrogenase-epimerase. | 0.689 |
TPAR_04207 | TPAR_02366 | A0A2S4KZH8 | A0A2S4L4R0 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Polyketide synthase. | 0.535 |
TPAR_04207 | TPAR_03149 | A0A2S4KZH8 | A0A2S4L2H5 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.975 |
TPAR_04207 | TPAR_04685 | A0A2S4KZH8 | A0A2S4KY53 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | PKS_KS domain-containing protein. | 0.535 |
TPAR_04207 | TPAR_06058 | A0A2S4KZH8 | A0A2S4KU70 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Polyketide synthase. | 0.535 |
TPAR_04207 | TPAR_06247 | A0A2S4KZH8 | A0A2S4KTM9 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Uncharacterized protein YmaE. | 0.898 |
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