Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NOP7 | TPAR_06822 | A0A2S4L6J9 | A0A2S4KS10 | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nitrogen assimilation transcription factor nirA. | 0.516 |
NOP7 | TPAR_07260 | A0A2S4L6J9 | A0A2S4KQU1 | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pre-rRNA-processing protein IPI1. | 0.834 |
NOP7 | TPAR_07661 | A0A2S4L6J9 | A0A2S4KPM2 | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pre-rRNA-processing protein IPI3. | 0.958 |
TPAR_00565 | TPAR_05220 | A0A2S4L9X0 | A0A2S4KWL2 | Arylamine N-acetyltransferase 2; Belongs to the arylamine N-acetyltransferase family. | Xanthine dehydrogenase. | 0.695 |
TPAR_00565 | TPAR_06822 | A0A2S4L9X0 | A0A2S4KS10 | Arylamine N-acetyltransferase 2; Belongs to the arylamine N-acetyltransferase family. | Nitrogen assimilation transcription factor nirA. | 0.492 |
TPAR_01539 | TPAR_06822 | A0A2S4L772 | A0A2S4KS10 | Uncharacterized protein. | Nitrogen assimilation transcription factor nirA. | 0.816 |
TPAR_03681 | TPAR_06822 | A0A2S4L122 | A0A2S4KS10 | Xylosyltransferase oxt. | Nitrogen assimilation transcription factor nirA. | 0.518 |
TPAR_05220 | TPAR_00565 | A0A2S4KWL2 | A0A2S4L9X0 | Xanthine dehydrogenase. | Arylamine N-acetyltransferase 2; Belongs to the arylamine N-acetyltransferase family. | 0.695 |
TPAR_05220 | TPAR_06822 | A0A2S4KWL2 | A0A2S4KS10 | Xanthine dehydrogenase. | Nitrogen assimilation transcription factor nirA. | 0.645 |
TPAR_05394 | TPAR_06822 | A0A2S4KW72 | A0A2S4KS10 | Uncharacterized protein. | Nitrogen assimilation transcription factor nirA. | 0.816 |
TPAR_06255 | TPAR_06822 | A0A2S4KTP5 | A0A2S4KS10 | Carboxylic ester hydrolase. | Nitrogen assimilation transcription factor nirA. | 0.474 |
TPAR_06822 | NOP7 | A0A2S4KS10 | A0A2S4L6J9 | Nitrogen assimilation transcription factor nirA. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.516 |
TPAR_06822 | TPAR_00565 | A0A2S4KS10 | A0A2S4L9X0 | Nitrogen assimilation transcription factor nirA. | Arylamine N-acetyltransferase 2; Belongs to the arylamine N-acetyltransferase family. | 0.492 |
TPAR_06822 | TPAR_01539 | A0A2S4KS10 | A0A2S4L772 | Nitrogen assimilation transcription factor nirA. | Uncharacterized protein. | 0.816 |
TPAR_06822 | TPAR_03681 | A0A2S4KS10 | A0A2S4L122 | Nitrogen assimilation transcription factor nirA. | Xylosyltransferase oxt. | 0.518 |
TPAR_06822 | TPAR_05220 | A0A2S4KS10 | A0A2S4KWL2 | Nitrogen assimilation transcription factor nirA. | Xanthine dehydrogenase. | 0.645 |
TPAR_06822 | TPAR_05394 | A0A2S4KS10 | A0A2S4KW72 | Nitrogen assimilation transcription factor nirA. | Uncharacterized protein. | 0.816 |
TPAR_06822 | TPAR_06255 | A0A2S4KS10 | A0A2S4KTP5 | Nitrogen assimilation transcription factor nirA. | Carboxylic ester hydrolase. | 0.474 |
TPAR_06822 | TPAR_07260 | A0A2S4KS10 | A0A2S4KQU1 | Nitrogen assimilation transcription factor nirA. | Pre-rRNA-processing protein IPI1. | 0.581 |
TPAR_06822 | TPAR_07661 | A0A2S4KS10 | A0A2S4KPM2 | Nitrogen assimilation transcription factor nirA. | Pre-rRNA-processing protein IPI3. | 0.591 |
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