LSM4 protein (Tolypocladium paradoxum) - STRING interaction network

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LSM4

U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (151 aa)

Predicted Functional Partners:

TPAR_08812

0.999

TPAR_06395

0.999

TPAR_04736

0.999

LSM5

0.999

LSM1

0.995

TPAR_04126

0.988

TPAR_02331

0.985

TPAR_07932

0.984

TPAR_05680

0.984

TPAR_08924

0.981

Your Current Organism:

Tolypocladium paradoxum

NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	LSM4	A0A2S4L3R7	A0A2S4KUK7	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.995
LSM1	LSM5	A0A2S4L3R7	A0A2S4LAV0	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.995
LSM1	TPAR_04126	A0A2S4L3R7	A0A2S4KZT6	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Small nuclear ribonucleoprotein Sm D2.	0.643
LSM1	TPAR_04736	A0A2S4L3R7	A0A2S4KXZ5	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNA-associated protein LSm7.	0.995
LSM1	TPAR_06395	A0A2S4L3R7	A0A2S4KTA2	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	U6 snRNP-associated protein Lsm3.	0.995
LSM1	TPAR_08812	A0A2S4L3R7	A0A2S4KLH0	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	DNA topoisomerase 2-associated protein pat1.	0.992
LSM1	TPAR_08924	A0A2S4L3R7	A0A2S4KKZ0	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.618
LSM4	LSM1	A0A2S4KUK7	A0A2S4L3R7	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.995
LSM4	LSM5	A0A2S4KUK7	A0A2S4LAV0	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
LSM4	TPAR_02331	A0A2S4KUK7	A0A2S4L4W0	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	RNA-binding protein.	0.985
LSM4	TPAR_04126	A0A2S4KUK7	A0A2S4KZT6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D2.	0.988
LSM4	TPAR_04736	A0A2S4KUK7	A0A2S4KXZ5	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated protein LSm7.	0.999
LSM4	TPAR_05680	A0A2S4KUK7	A0A2S4KVE1	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U4/U6.U5 tri-snRNP-associated protein snu66.	0.984
LSM4	TPAR_06395	A0A2S4KUK7	A0A2S4KTA2	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNP-associated protein Lsm3.	0.999
LSM4	TPAR_07932	A0A2S4KUK7	A0A2S4KNS6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.984
LSM4	TPAR_08812	A0A2S4KUK7	A0A2S4KLH0	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	DNA topoisomerase 2-associated protein pat1.	0.999
LSM4	TPAR_08924	A0A2S4KUK7	A0A2S4KKZ0	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.981
LSM5	LSM1	A0A2S4LAV0	A0A2S4L3R7	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.995
LSM5	LSM4	A0A2S4LAV0	A0A2S4KUK7	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM5	TPAR_02331	A0A2S4LAV0	A0A2S4L4W0	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	RNA-binding protein.	0.985

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