Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TPAR_03498 | TPAR_05732 | A0A2S4L1Q1 | A0A2S4KV82 | GTPase MTG2, mitochondrial. | Sporulation protein RMD1. | 0.479 |
TPAR_04594 | TPAR_05732 | A0A2S4KYB8 | A0A2S4KV82 | U3 small nucleolar RNA-associated protein 14. | Sporulation protein RMD1. | 0.451 |
TPAR_04594 | TPAR_08360 | A0A2S4KYB8 | A0A2S4KML3 | U3 small nucleolar RNA-associated protein 14. | U3 small nucleolar RNA-associated protein 15. | 0.992 |
TPAR_05732 | TPAR_03498 | A0A2S4KV82 | A0A2S4L1Q1 | Sporulation protein RMD1. | GTPase MTG2, mitochondrial. | 0.479 |
TPAR_05732 | TPAR_04594 | A0A2S4KV82 | A0A2S4KYB8 | Sporulation protein RMD1. | U3 small nucleolar RNA-associated protein 14. | 0.451 |
TPAR_05732 | TPAR_08360 | A0A2S4KV82 | A0A2S4KML3 | Sporulation protein RMD1. | U3 small nucleolar RNA-associated protein 15. | 0.459 |
TPAR_08360 | TPAR_04594 | A0A2S4KML3 | A0A2S4KYB8 | U3 small nucleolar RNA-associated protein 15. | U3 small nucleolar RNA-associated protein 14. | 0.992 |
TPAR_08360 | TPAR_05732 | A0A2S4KML3 | A0A2S4KV82 | U3 small nucleolar RNA-associated protein 15. | Sporulation protein RMD1. | 0.459 |