STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_04972PH domain-containing protein C19A8.02. (653 aa)    
Predicted Functional Partners:
TPAR_04973
PH domain-containing protein C19A8.02.
 
      0.721
TPAR_03292
Ubiquitin-like protein SMT3.
    
 0.633
TPAR_04137
U1 small nuclear ribonucleoprotein.
   
 0.588
TPAR_03699
Pre-mRNA-splicing factor srp1.
   
 0.578
TPAR_01686
Pre-mRNA-splicing factor srp2.
   
 0.578
TPAR_07997
SP-RING-type domain-containing protein.
    
  0.536
TPAR_06196
E3 SUMO-protein ligase pli1.
    
  0.536
TPAR_00701
SAP domain-containing protein.
   
 
 0.501
TPAR_08951
Cleavage stimulation factor subunit 2.
   
 0.445
TPAR_05881
RNA-binding post-transcriptional regulator cip2.
   
 0.445
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.