STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_04937tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial. (1015 aa)    
Predicted Functional Partners:
TPAR_00189
tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial.
 
      0.821
TPAR_03364
Protein kinase gsk3; Belongs to the protein kinase superfamily.
    
 0.758
TPAR_06013
Lid2 complex component lid2.
   
 0.749
TPAR_05959
Uncharacterized protein.
   
 0.749
TPAR_08450
Ubiquitin carboxyl-terminal hydrolase 34; Belongs to the peptidase C19 family.
  
 
  0.731
TPAR_01994
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
  0.706
TPAR_01668
Uncharacterized protein.
    
 0.698
TPAR_08740
Uncharacterized protein.
    
  0.665
TPAR_08606
Uncharacterized protein.
    
  0.665
TPAR_04285
Ubiquitin carboxyl-terminal hydrolase 2; Belongs to the peptidase C19 family.
    
  0.665
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.