STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_04916Transcription factor SKN7. (572 aa)    
Predicted Functional Partners:
TPAR_07889
Flavin reductase-like, FMN-binding protein.
    
 0.993
TPAR_07888
HATPase_c domain-containing protein.
    
 0.993
TPAR_00703
Tuberous sclerosis 1 protein.
    
 0.993
TPAR_02942
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.986
TPAR_03364
Protein kinase gsk3; Belongs to the protein kinase superfamily.
    
 0.982
TPAR_07224
WD repeat-containing protein mip1.
   
 0.980
TPAR_07225
Uncharacterized protein.
   
 0.980
TPAR_02777
Uncharacterized protein.
    
 0.980
TPAR_05306
Histone deacetylase HOS3.
    
 0.978
TPAR_03758
Protein wos2.
   
 0.978
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.