STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_044703-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (633 aa)    
Predicted Functional Partners:
TPAR_04127
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.851
TPAR_06560
Methylmalonate semialdehyde dehydrogenase.
   
 0.836
TPAR_05871
Methylmalonate-semialdehyde dehydrogenase, mitochondrial.
   
 0.836
TPAR_02026
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.791
TPAR_00734
Aldehyde dehydrogenase-like protein; Belongs to the aldehyde dehydrogenase family.
   
  0.791
TPAR_01188
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
   
 0.718
TPAR_02414
CFEM domain-containing protein.
    
 0.711
TPAR_07642
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.694
TPAR_01471
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.694
TPAR_03479
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.681
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
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