STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_03728Uncharacterized protein. (347 aa)    
Predicted Functional Partners:
TPAR_08654
RAD50-interacting protein 1.
    
 0.980
TPAR_08779
Is centromere binding protein at prophase.
    
 0.979
TPAR_08584
Protein transport protein sec22; Belongs to the synaptobrevin family.
    
 0.928
TPAR_01067
Protein transport protein sec22.
    
 0.928
TPAR_05677
Uncharacterized protein.
    
 0.911
TPAR_00991
Synaptobrevin ykt6; Belongs to the synaptobrevin family.
    
 
 0.881
TPAR_08422
Protein transport protein BOS1.
    
 0.864
TPAR_03191
Integral membrane protein sed5.
    
 
 0.861
TPAR_02539
Protein sly1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.858
TPAR_07919
t-SNARE coiled-coil homology domain-containing protein.
   
 0.833
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.