STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_03470Vacuolar protein-sorting-associated protein 46. (207 aa)    
Predicted Functional Partners:
TPAR_02182
DOA4-independent degradation protein 4.
   
 0.998
TPAR_02127
Vacuolar protein sorting-associated protein vts1.
    
 0.998
TPAR_08202
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
   
 0.996
TPAR_05161
Vacuolar-sorting protein SNF7.
    
 0.989
TPAR_02536
Charged multivesicular body protein 5.
   
 0.989
TPAR_06773
IST1 protein.
    
 
 0.987
TPAR_03757
Vacuolar protein sorting-associated protein 24.
   
 0.987
TPAR_02702
SNF7 family protein.
   
 0.921
TPAR_07453
Uncharacterized protein.
    
 0.894
TPAR_02907
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.845
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.