Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TPAR_01883 | TPAR_02106 | A0A2S4L638 | A0A2S4L5K8 | Curved DNA-binding protein. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.976 |
TPAR_01883 | TPAR_03229 | A0A2S4L638 | A0A2S4L257 | Curved DNA-binding protein. | Uncharacterized protein. | 0.802 |
TPAR_01883 | TPAR_04294 | A0A2S4L638 | A0A2S4KZB7 | Curved DNA-binding protein. | WD repeat protein. | 0.974 |
TPAR_01883 | TPAR_04358 | A0A2S4L638 | A0A2S4KZ45 | Curved DNA-binding protein. | Nuclear GTP-binding protein NUG1. | 0.990 |
TPAR_01883 | TPAR_05193 | A0A2S4L638 | A0A2S4KWM9 | Curved DNA-binding protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.994 |
TPAR_01883 | TPAR_05849 | A0A2S4L638 | A0A2S4KUW4 | Curved DNA-binding protein. | Zinc finger protein bud20. | 0.953 |
TPAR_01883 | TPAR_06955 | A0A2S4L638 | A0A2S4KRM9 | Curved DNA-binding protein. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.993 |
TPAR_01883 | TPAR_07260 | A0A2S4L638 | A0A2S4KQU1 | Curved DNA-binding protein. | Pre-rRNA-processing protein IPI1. | 0.879 |
TPAR_01883 | TPAR_07661 | A0A2S4L638 | A0A2S4KPM2 | Curved DNA-binding protein. | Pre-rRNA-processing protein IPI3. | 0.988 |
TPAR_01883 | YTM1 | A0A2S4L638 | A0A2S4LAW4 | Curved DNA-binding protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.923 |
TPAR_02106 | TPAR_01883 | A0A2S4L5K8 | A0A2S4L638 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Curved DNA-binding protein. | 0.976 |
TPAR_02106 | TPAR_03229 | A0A2S4L5K8 | A0A2S4L257 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Uncharacterized protein. | 0.880 |
TPAR_02106 | TPAR_04294 | A0A2S4L5K8 | A0A2S4KZB7 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | WD repeat protein. | 0.988 |
TPAR_02106 | TPAR_04358 | A0A2S4L5K8 | A0A2S4KZ45 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Nuclear GTP-binding protein NUG1. | 0.993 |
TPAR_02106 | TPAR_05193 | A0A2S4L5K8 | A0A2S4KWM9 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.993 |
TPAR_02106 | TPAR_05849 | A0A2S4L5K8 | A0A2S4KUW4 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Zinc finger protein bud20. | 0.963 |
TPAR_02106 | TPAR_06955 | A0A2S4L5K8 | A0A2S4KRM9 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.990 |
TPAR_02106 | TPAR_07260 | A0A2S4L5K8 | A0A2S4KQU1 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Pre-rRNA-processing protein IPI1. | 0.859 |
TPAR_02106 | TPAR_07661 | A0A2S4L5K8 | A0A2S4KPM2 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Pre-rRNA-processing protein IPI3. | 0.974 |
TPAR_02106 | YTM1 | A0A2S4L5K8 | A0A2S4LAW4 | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.846 |
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