STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_02097tRNA (Adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6; Belongs to the FMO family. (1235 aa)    
Predicted Functional Partners:
TPAR_06068
tRNA (Adenine(58)-N(1))-methyltransferase catalytic subunit trm61.
   
 0.998
TPAR_07905
tRNA (Adenine(58)-N(1))-methyltransferase TrmI.
   
 0.988
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
  
 0.912
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
    0.871
TPAR_05015
ATP-dependent RNA helicase DBP3; Belongs to the DEAD box helicase family.
   
   0.850
TPAR_01236
ATP-dependent RNA helicase DBP9.
   
   0.850
TPAR_08746
RNA helicase.
   
   0.843
TPAR_00099
Ribosome biogenesis protein RPF2.
   
  
 0.824
TPAR_00019
Nucleolar protein 12.
   
   0.821
TPAR_02031
ATP-dependent RNA helicase dbp6.
   
   0.819
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.