STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_01392Polyadenylate-binding protein 2. (196 aa)    
Predicted Functional Partners:
TPAR_00427
Nuclear cap-binding protein subunit 2.
    
0.988
TPAR_07790
Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16.
    
  0.981
TPAR_08932
Splicing factor U2AF 50 kDa subunit.
   
 0.980
TPAR_02614
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.950
TPAR_06017
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.942
TPAR_08951
Cleavage stimulation factor subunit 2.
  
0.936
TPAR_01982
RNA-binding protein 8A-B.
  
 
 0.936
TPAR_00701
SAP domain-containing protein.
   
 0.936
TPAR_03148
Regulator of nonsense transcripts UPF2.
    
 0.915
TPAR_05881
RNA-binding post-transcriptional regulator cip2.
   
 0.913
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
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