STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_01204Uncharacterized protein. (523 aa)    
Predicted Functional Partners:
TPAR_03859
SNF1 protein kinase subunit beta-2.
    
 0.660
TPAR_02342
AMPK1_CBM domain-containing protein.
    
 0.660
TPAR_06796
Nuclear protein SNF4.
   
 0.618
TPAR_06797
Rho-GTPase-activating protein 6.
   
 0.618
TPAR_04715
Protein SDS23; Involved in DNA replication and cell separation. Belongs to the SDS23 family.
   
 0.618
TPAR_07224
WD repeat-containing protein mip1.
    
 0.587
TPAR_07225
Uncharacterized protein.
    
 0.587
TPAR_00541
Meiotically up-regulated protein.
   
 0.581
TPAR_00542
Ribosomal protein subunit S4.
   
 0.581
TPAR_07304
Urease; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
    
  0.574
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.