STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_00764Chromatin remodeling factor mit1. (1480 aa)    
Predicted Functional Partners:
TPAR_05508
Histone acetyltransferase type B subunit 2.
   
 0.937
TPAR_08569
Methyl-CpG-binding domain protein 4.
    
 0.882
TPAR_08107
Histone deacetylase RPD3.
   
 0.875
TPAR_04410
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.875
TPAR_07737
Vacuolar protein sorting-associated protein 33A.
   
 0.809
TPAR_04590
Chromatin-associated protein swi6.
    
 0.782
TPAR_00111
Histone deacetylase complex subunit SAP18.
    
 0.758
TPAR_02461
Chromatin modification-like protein eaf3.
    
 0.731
TPAR_05042
C2H2-type domain-containing protein.
    
 0.702
TPAR_03096
DNA repair protein rhp26.
  
  
 
0.699
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.