STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_00481Uncharacterized protein. (235 aa)    
Predicted Functional Partners:
TPAR_04534
ATP-dependent RNA helicase mtr4.
   
 
 0.760
TPAR_05031
Non-canonical poly(A) RNA polymerase PAPD5.
   
 
 0.731
TPAR_03696
rRNA methyltransferase 2, mitochondrial.
   
 
 0.572
TPAR_00808
54S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
  0.530
TPAR_06693
RNA-binding protein sce3.
   
 
 0.528
TPAR_02662
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.521
TPAR_02829
Protein mak16.
   
   0.507
TPAR_02769
Uncharacterized protein.
   
   0.502
TPAR_02768
60S ribosomal protein L4-B.
   
   0.502
TPAR_07460
Ribosomal protein S6e.
   
   0.498
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.