STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPAR_00001Fringe-like protein. (483 aa)    
Predicted Functional Partners:
TPAR_05984
Transcription elongation factor SPT5.
   
 0.911
TPAR_02394
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.903
TPAR_03479
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.893
TPAR_00827
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.893
TPAR_08856
DNA-directed RNA polymerase II subunit RPB3.
    
  0.889
TPAR_07334
RPOL9 domain-containing protein.
    
  0.874
TPAR_07885
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
  0.854
TPAR_04160
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.853
TPAR_00231
DNA-directed RNA polymerase II subunit RPB11.
    
  0.850
TPAR_01124
DNA-directed RNA polymerase II subunit rpb7.
    
  0.848
Your Current Organism:
Tolypocladium paradoxum
NCBI taxonomy Id: 94208
Other names: Cordyceps paradoxa, Elaphocordyceps paradoxa, T. paradoxum, Tolypocladium paradoxum (Kobayasi) Quandt, Kepler & Spatafora, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.