STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO09611.1Hypothetical protein. (485 aa)    
Predicted Functional Partners:
KRO08673.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.902
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.804
cinA
Competence-damage inducible protein; Belongs to the CinA family.
  
 
  0.719
KRO11055.1
Hypothetical protein.
  
 
 0.707
KRO14545.1
Hypothetical protein.
 
   0.651
KRO14243.1
SLT domain protein.
 
 
0.640
KRO11727.1
Hypothetical protein.
  
     0.600
KRO08440.1
Serine threonine protein kinase.
 
  
 0.567
KRO08603.1
Carboxy-terminal processing proteinase; Belongs to the peptidase S41A family.
     
 0.539
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
  0.533
Your Current Organism:
Lactobacillus xiangfangensis
NCBI taxonomy Id: 942150
Other names: L. xiangfangensis, LMG 26013, LMG:26013, Lactobacillus sp. 3.1.1, Lactobacillus xiangfangensis Gu et al. 2012, NBRC 108914, NCIMB 14687, strain 3.1.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.