STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO08579.1Hypothetical protein; Belongs to the 'phage' integrase family. (285 aa)    
Predicted Functional Partners:
KRO08550.1
Hypothetical protein.
  
     0.608
KRO13910.1
Hypothetical protein.
 
     0.600
KRO11506.1
Manganese abc transporter, atp-binding protein (mtsc).
   
    0.577
KRO08681.1
Hypothetical protein.
  
     0.555
KRO09051.1
Hypothetical protein.
  
    0.541
KRO14699.1
Cell surface protein precursor, lpxtg-motif cell wall anchor.
  
    0.529
KRO13982.1
Hypothetical protein.
 
     0.525
KRO09149.1
Hypothetical protein.
 
     0.508
KRO11727.1
Hypothetical protein.
  
     0.507
KRO13911.1
Branched-chain amino acid transport protein.
 
    0.487
Your Current Organism:
Lactobacillus xiangfangensis
NCBI taxonomy Id: 942150
Other names: L. xiangfangensis, LMG 26013, LMG:26013, Lactobacillus sp. 3.1.1, Lactobacillus xiangfangensis Gu et al. 2012, NBRC 108914, NCIMB 14687, strain 3.1.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.