STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO08083.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
KRO08632.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
  0.752
cinA
Competence-damage inducible protein; Belongs to the CinA family.
    
 0.742
KRO14690.1
Membrane-bound protease, caax family.
 
     0.717
ribA
Gtp cyclohydrolase ii; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
 0.715
KRO07555.1
Hypothetical protein.
 
     0.638
KRO14337.1
Hypothetical protein.
 
    0.611
KRO14545.1
Hypothetical protein.
 
     0.610
KRO10929.1
Hypothetical protein.
  
     0.606
KRO14953.1
Hypothetical protein.
 
 
  0.601
KRO08082.1
Hypothetical protein.
 
     0.599
Your Current Organism:
Lactobacillus xiangfangensis
NCBI taxonomy Id: 942150
Other names: L. xiangfangensis, LMG 26013, LMG:26013, Lactobacillus sp. 3.1.1, Lactobacillus xiangfangensis Gu et al. 2012, NBRC 108914, NCIMB 14687, strain 3.1.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.