STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO07838.1ABC transporter, permease protein. (402 aa)    
Predicted Functional Partners:
KRO07837.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 0.977
KRO07839.1
Transcription regulator.
 
     0.949
KRO07641.1
ABC-type multidrug transport system, ATPase component.
 
 0.920
KRO07639.1
Transcriptional regulator.
     0.783
KRO10895.1
Transcription regulator.
     0.759
KRO09741.1
TetR family transcriptional regulator.
 
     0.626
KRO10828.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 0.573
KRO09048.1
Hypothetical protein.
  
 
  0.565
KRO07909.1
ABC transporter, ATP-binding protein.
 
 0.536
KRO07840.1
Nicotinate phosphoribosyltransferase.
 
    0.508
Your Current Organism:
Lactobacillus xiangfangensis
NCBI taxonomy Id: 942150
Other names: L. xiangfangensis, LMG 26013, LMG:26013, Lactobacillus sp. 3.1.1, Lactobacillus xiangfangensis Gu et al. 2012, NBRC 108914, NCIMB 14687, strain 3.1.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.