STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO07466.1Glutamine ABC superfamily ATP binding cassette transporter, substrate binding protein. (284 aa)    
Predicted Functional Partners:
KRO07468.1
Glutamine ABC transporter, permease protein.
 0.999
KRO07467.1
Glutamine abc transporter, atp-binding protein.
 
 0.991
KRO14549.1
Amino acid ABC transporter permease.
 0.973
KRO09003.1
Glutamine ABC superfamily ATP binding cassette transporter, permease protein.
 0.877
KRO09002.1
Glutamine ABC transporter, permease protein.
 0.873
KRO07915.1
Glutamine abc transporter, atp-binding protein.
 
 0.866
KRO09068.1
Glutamine ABC transporter, ATP-binding protein.
 
 0.864
KRO14548.1
Amino acid abc transporter, atp-binding protein.
 
 0.837
KRO09005.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 0.830
KRO11700.1
Polar amino acid ABC transporter inner membrane subunit.
0.568
Your Current Organism:
Lactobacillus xiangfangensis
NCBI taxonomy Id: 942150
Other names: L. xiangfangensis, LMG 26013, LMG:26013, Lactobacillus sp. 3.1.1, Lactobacillus xiangfangensis Gu et al. 2012, NBRC 108914, NCIMB 14687, strain 3.1.1
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