STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO11741.1Abc transporter, atp-binding and permease protein. (667 aa)    
Predicted Functional Partners:
KRO11778.1
Peptide ABC transporter ATPase.
  
0.998
KRO10491.1
Abc transporter, permease protein.
  
 0.998
KRO08094.1
ABC superfamily ATP binding cassette transporter, permease protein.
  
 
 0.803
KRO07559.1
ABC transporter, ATP-binding and permease protein.
 
0.730
KRO12566.1
Peptide ABC transporter ATPase.
 
0.730
KRO14451.1
ABC transporter ATP-binding protein.
 
0.729
KRO10913.1
Abc transporter, atp-binding protein.
 
0.727
KRO08006.1
ABC transporter ATP-binding component.
 
0.724
KRO08095.1
ABC transporter ATP-binding protein.
 
0.720
KRO10490.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
0.712
Your Current Organism:
Lactobacillus xiangfangensis
NCBI taxonomy Id: 942150
Other names: L. xiangfangensis, LMG 26013, LMG:26013, Lactobacillus sp. 3.1.1, Lactobacillus xiangfangensis Gu et al. 2012, NBRC 108914, NCIMB 14687, strain 3.1.1
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