STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO11061.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.961
KRO10984.1
Glycine betaine carnitine choline ABC transporter, substrate binding and permease protein.
    
  0.781
KRO11733.1
Methylenetetrahydrofolate reductase.
    
 0.714
KRO09625.1
Hypothetical protein.
  
     0.671
KRO08359.1
Hpk5 protein.
 
     0.657
mecA
Adapter protein meca; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
  
     0.644
KRO10771.1
Hypothetical protein.
 
 
 0.636
KRO13917.1
Integral membrane protein.
 
     0.606
KRO09143.1
Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
 
   0.605
rpoE
rpoE protein; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
  
     0.565
Your Current Organism:
Lactobacillus xiangfangensis
NCBI taxonomy Id: 942150
Other names: L. xiangfangensis, LMG 26013, LMG:26013, Lactobacillus sp. 3.1.1, Lactobacillus xiangfangensis Gu et al. 2012, NBRC 108914, NCIMB 14687, strain 3.1.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.