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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMOP00000001005DnaJ heat shock protein family (Hsp40) member C21. (457 aa)    
Predicted Functional Partners:
ENSMMOP00000016758
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
    
 
 0.842
ENSMMOP00000002915
Peroxiredoxin 6.
    
  0.833
PRDX6
Peroxiredoxin 6.
    
  0.833
ENSMMOP00000011904
Proliferation-associated 2G4, b.
   
 
 0.769
ENSMMOP00000028930
Proliferation-associated 2G4, a.
   
 
 0.769
ENSMMOP00000014692
Zinc finger protein 622.
   
 
 0.767
ENSMMOP00000014695
Reticulophagy regulator 1.
   
 
 0.767
ENSMMOP00000013155
Thioredoxin reductase 3.
     
 0.762
ENSMMOP00000019619
Thioredoxin reductase 2, tandem duplicate 1; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
     
 0.754
ENSMMOP00000008017
Reticulophagy regulator family member 2.
   
 
 0.710
Your Current Organism:
Mola mola
NCBI taxonomy Id: 94237
Other names: M. mola, ocean sunfish
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