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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMOP00000001022Zgc:92873. (332 aa)    
Predicted Functional Partners:
LRRC49
Leucine rich repeat containing 49.
    
 
 0.881
ENSMMOP00000001873
Tubulin tyrosine ligase-like family, member 1.
    
 
 0.868
ENSMMOP00000016092
Tubulin polyglutamylase complex subunit 2.
    
   0.868
ENSMMOP00000023368
Nicolin 1.
    
   0.779
ENSMMOP00000010887
Tubulin tyrosine ligase.
    
   0.605
EIF3F
Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
   0.579
ENSMMOP00000013545
Melanocyte proliferating gene 1.
      
 0.537
ENSMMOP00000011392
Uncharacterized protein.
    
 
 0.513
ENSMMOP00000016644
TBC1 domain family, member 19.
   
   0.508
ENSMMOP00000011970
Major facilitator superfamily domain containing 5.
      
 0.485
Your Current Organism:
Mola mola
NCBI taxonomy Id: 94237
Other names: M. mola, ocean sunfish
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