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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMOP00000001075General transcription factor IIH, polypeptide 1. (550 aa)    
Predicted Functional Partners:
ENSMMOP00000006610
Excision repair cross-complementation group 2.
    
 0.999
ENSMMOP00000015666
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.999
ENSMMOP00000022425
General transcription factor IIH, polypeptide 3.
    
 0.999
ENSMMOP00000023875
Excision repair cross-complementation group 3.
   
 0.999
ENSMMOP00000007235
General transcription factor IIE, polypeptide 1, alpha.
   
 0.998
ENSMMOP00000015941
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
    
 0.998
ENSMMOP00000010638
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
    
 0.997
ENSMMOP00000007279
Cyclin H; Belongs to the cyclin family.
    
 0.995
ENSMMOP00000025463
General transcription factor IIH, polypeptide 5.
    
 0.995
ENSMMOP00000010415
General transcription factor IIH, polypeptide 2.
    
 0.994
Your Current Organism:
Mola mola
NCBI taxonomy Id: 94237
Other names: M. mola, ocean sunfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.