STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMOP00000001774Retinoid isomerohydrolase RPE65 b. (540 aa)    
Predicted Functional Partners:
ENSMMOP00000004970
Lecithin retinol acyltransferase a.
     
 0.922
ENSMMOP00000007346
Retinol dehydrogenase 5 (11-cis/9-cis); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.920
ENSMMOP00000004973
LRAT domain-containing protein.
     
 0.909
ENSMMOP00000004483
Retinol dehydrogenase 10a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.894
ENSMMOP00000020326
Retinol dehydrogenase 20; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.894
ENSMMOP00000004155
O-acyltransferase.
   
 
 0.886
DGAT1
O-acyltransferase.
   
 
 0.883
ENSMMOP00000014663
Lecithin retinol acyltransferase b, tandem duplicate 2.
     
 0.878
ENSMMOP00000008305
PNPLA domain-containing protein.
     
 0.871
ENSMMOP00000022028
Retinoid isomerohydrolase RPE65 a.
     
  0.868
Your Current Organism:
Mola mola
NCBI taxonomy Id: 94237
Other names: M. mola, ocean sunfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.