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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMOP00000003333X-prolyl aminopeptidase 3, mitochondrial. (497 aa)    
Predicted Functional Partners:
ENSMMOP00000005635
Si:ch211-153b23.3.
    
  0.743
ENSMMOP00000010985
Dimethylglycine dehydrogenase.
  
 0.725
PDPR
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
 0.725
ENSMMOP00000021454
Aminomethyltransferase.
  
 0.725
ENSMMOP00000028171
Sarcosine dehydrogenase.
  
 0.725
ENSMMOP00000004749
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
   
 
 0.651
ENSMMOP00000005632
Immunoresponsive gene 1, like.
  
 
 0.651
ENSMMOP00000012649
Pipecolic acid oxidase.
  
 
 0.651
ENSMMOP00000014205
Zgc:172341.
  
 
 0.651
ENSMMOP00000023194
D-amino-acid oxidase, tandem duplicate 2.
  
 
 0.651
Your Current Organism:
Mola mola
NCBI taxonomy Id: 94237
Other names: M. mola, ocean sunfish
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