Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ENSMMOP00000001152 | ENSMMOP00000002706 | RAB3A interacting protein (rabin3)-like 1. | Exocyst complex component 4. | 0.857 |
ENSMMOP00000001152 | ENSMMOP00000004940 | RAB3A interacting protein (rabin3)-like 1. | Si:dkey-7f3.9. | 0.717 |
ENSMMOP00000001152 | ENSMMOP00000012826 | RAB3A interacting protein (rabin3)-like 1. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.741 |
ENSMMOP00000001152 | ENSMMOP00000016299 | RAB3A interacting protein (rabin3)-like 1. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.741 |
ENSMMOP00000001152 | ENSMMOP00000022874 | RAB3A interacting protein (rabin3)-like 1. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.646 |
ENSMMOP00000001152 | ENSMMOP00000028811 | RAB3A interacting protein (rabin3)-like 1. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.741 |
ENSMMOP00000002706 | ENSMMOP00000001152 | Exocyst complex component 4. | RAB3A interacting protein (rabin3)-like 1. | 0.857 |
ENSMMOP00000002706 | ENSMMOP00000004940 | Exocyst complex component 4. | Si:dkey-7f3.9. | 0.661 |
ENSMMOP00000002706 | ENSMMOP00000008424 | Exocyst complex component 4. | RAB3A interacting protein (rabin3). | 0.857 |
ENSMMOP00000004940 | ENSMMOP00000001152 | Si:dkey-7f3.9. | RAB3A interacting protein (rabin3)-like 1. | 0.717 |
ENSMMOP00000004940 | ENSMMOP00000002706 | Si:dkey-7f3.9. | Exocyst complex component 4. | 0.661 |
ENSMMOP00000004940 | ENSMMOP00000008424 | Si:dkey-7f3.9. | RAB3A interacting protein (rabin3). | 0.717 |
ENSMMOP00000004940 | ENSMMOP00000012826 | Si:dkey-7f3.9. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.674 |
ENSMMOP00000004940 | ENSMMOP00000016299 | Si:dkey-7f3.9. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.674 |
ENSMMOP00000004940 | ENSMMOP00000022874 | Si:dkey-7f3.9. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.687 |
ENSMMOP00000004940 | ENSMMOP00000023312 | Si:dkey-7f3.9. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.711 |
ENSMMOP00000004940 | ENSMMOP00000025709 | Si:dkey-7f3.9. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.660 |
ENSMMOP00000004940 | ENSMMOP00000026226 | Si:dkey-7f3.9. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.711 |
ENSMMOP00000004940 | ENSMMOP00000028811 | Si:dkey-7f3.9. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.674 |
ENSMMOP00000008424 | ENSMMOP00000002706 | RAB3A interacting protein (rabin3). | Exocyst complex component 4. | 0.857 |
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