STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMOP00000007686PDZ domain-containing protein. (86 aa)    
Predicted Functional Partners:
ENSMMOP00000021404
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.788
ENSMMOP00000028919
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.754
ENSMMOP00000020364
Actin related protein 5; Belongs to the actin family.
    
 0.745
ENSMMOP00000025779
Actin-like 6A; Belongs to the actin family.
   
 0.743
ENSMMOP00000023875
Excision repair cross-complementation group 3.
   
 0.731
ENSMMOP00000001075
General transcription factor IIH, polypeptide 1.
    
 0.729
ENSMMOP00000022425
General transcription factor IIH, polypeptide 3.
    
 0.727
ENSMMOP00000000851
Polymerase (RNA) mitochondrial (DNA directed).
    
 0.725
ENSMMOP00000007683
ASD2 domain-containing protein.
 
      0.710
ENSMMOP00000000696
Translocase of outer mitochondrial membrane 20.
    
  0.703
Your Current Organism:
Mola mola
NCBI taxonomy Id: 94237
Other names: M. mola, ocean sunfish
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