STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMOP00000009381DENN/MADD domain containing 5B. (1277 aa)    
Predicted Functional Partners:
ENSMMOP00000022874
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
     
 0.622
ENSMMOP00000002441
RAB41, member RAS oncogene family.
    
 
 0.578
ENSMMOP00000008988
RAB6B, member RAS oncogene family a.
    
 
 0.578
ENSMMOP00000021319
RAB6A, member RAS oncogene family.
    
 
 0.578
RAB6B
RAB6B, member RAS oncogene family.
    
 
 0.578
RAB28
RAB28, member RAS oncogene family.
     
 0.510
ENSMMOP00000011616
Ribosome production factor 1 homolog.
      
 0.434
ENSMMOP00000014287
RAB34, member RAS oncogene family b.
    
 
 0.430
ENSMMOP00000019016
RAB34, member RAS oncogene family a.
    
 
 0.430
ENSMMOP00000028313
RAB36, member RAS oncogene family.
    
 
 0.430
Your Current Organism:
Mola mola
NCBI taxonomy Id: 94237
Other names: M. mola, ocean sunfish
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