STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMOP00000015807Im:7138535. (346 aa)    
Predicted Functional Partners:
ENSMMOP00000020269
DEAD (Asp-Glu-Ala-Asp) box helicase 1.
   
 
 0.930
ENSMMOP00000005646
RNA transcription, translation and transport factor.
    
 
 0.900
ENSMMOP00000011309
Nuclear FMR1 interacting protein 2.
    
 
 0.628
ENSMMOP00000001721
LsmAD domain-containing protein.
    
 
 0.463
ENSMMOP00000017326
Ataxin 2.
    
 
 0.463
ENSMMOP00000027569
LSM12 homolog b.
    
 
 0.463
ENSMMOP00000021543
Huntingtin interacting protein K.
      
 0.429
RTCB
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.
    
 
 0.424
ENSMMOP00000024165
Eukaryotic translation initiation factor 4A, isoform 2; Belongs to the DEAD box helicase family.
    
 
 0.419
Your Current Organism:
Mola mola
NCBI taxonomy Id: 94237
Other names: M. mola, ocean sunfish
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