STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMOP00000017614H2A histone family, member Y; Belongs to the histone H2A family. (369 aa)    
Predicted Functional Partners:
ENSMMOP00000004121
Myb-like, SWIRM and MPN domains 1.
  
 0.997
ENSMMOP00000005505
Lysine (K)-specific demethylase 6A.
  
 0.895
ENSMMOP00000009049
Lysine (K)-specific demethylase 6A, like.
  
 0.895
ENSMMOP00000010330
Lysine (K)-specific demethylase 6B, b.
  
 0.893
KDM6B
Lysine demethylase 6B.
  
 0.893
ENSMMOP00000012965
Histone deacetylase 11.
   
 0.892
ENSMMOP00000020862
Histone deacetylase 12.
   
 0.892
ENSMMOP00000013177
Uncharacterized protein.
   
 0.881
HDAC3
Histone deacetylase 3.
   
 0.881
HDAC1
Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
   
 0.880
Your Current Organism:
Mola mola
NCBI taxonomy Id: 94237
Other names: M. mola, ocean sunfish
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