STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSMMOP00000027399Tetratricopeptide repeat domain 25. (441 aa)    
Predicted Functional Partners:
ENSMMOP00000024586
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.928
ENSMMOP00000007215
Armadillo repeat containing 4.
  
 
 0.906
ENSMMOP00000026155
EF-hand calcium binding domain 1.
   
 0.888
ENSMMOP00000014083
Coiled-coil domain containing 114.
   
 
 0.883
ENSMMOP00000009526
Coiled-coil domain containing 151.
  
 
 0.873
ENSMMOP00000019430
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
  0.831
ENSMMOP00000021055
Uncharacterized protein.
   
 0.826
ENSMMOP00000027527
Tektin 3.
   
 
 0.822
ENSMMOP00000006289
Cilia and flagella associated protein 45.
   
 
 0.817
ENSMMOP00000011441
Cilia and flagella associated protein 52.
   
 0.812
Your Current Organism:
Mola mola
NCBI taxonomy Id: 94237
Other names: M. mola, ocean sunfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.