STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZD23382.1LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (937 aa)    
Predicted Functional Partners:
KZD23061.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.955
KZD23060.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.954
KZD23062.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.917
KZD25184.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.779
KZD25618.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.711
KZD22073.1
Sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.708
KZD24660.1
Sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.708
KZD23107.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.683
KZD23063.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.664
KZD22596.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.656
Your Current Organism:
Tardiphaga robiniae
NCBI taxonomy Id: 943830
Other names: CCUG 61473, LMG 26467, LMG:26467, Rhodopseudomonas sp. LMG 26467, Rhodopseudomonas sp. R-45977, T. robiniae, Tardiphaga robiniae De Meyer et al. 2012, Tardiphaga sp. Vaf-02, Tardiphaga sp. Vaf-04, Tardiphaga sp. Vaf-05, Tardiphaga sp. Vaf-06, Tardiphaga sp. Vaf-07, Tardiphaga sp. Vaf-27, Tardiphaga sp. Vaf-28, Tardiphaga sp. Vaf-71, Tardiphaga sp. Vaf-76, Tardiphaga sp. Vaf-91, Tardiphaga sp. Vaf-93, strain R-45977
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.