STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZD24339.1Translation initiation inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)    
Predicted Functional Partners:
KZD22671.1
Translation initiation inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.763
KZD23674.1
Enamine deaminase RidA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.751
rutC
Pyrimidine utilization protein C; May reduce aminoacrylate peracid to aminoacrylate. Required to remove a toxic intermediate produce by the pyrimidine nitrogen degradation.
  
     0.731
KZD22160.1
Reactive intermediate/imine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.730
KZD25923.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.587
KZD24338.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.493
nnrD
Bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-spec [...]
 
  
 0.464
KZD21982.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.457
KZD25089.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.456
RibD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
 
   0.455
Your Current Organism:
Tardiphaga robiniae
NCBI taxonomy Id: 943830
Other names: CCUG 61473, LMG 26467, LMG:26467, Rhodopseudomonas sp. LMG 26467, Rhodopseudomonas sp. R-45977, T. robiniae, Tardiphaga robiniae De Meyer et al. 2012, Tardiphaga sp. Vaf-02, Tardiphaga sp. Vaf-04, Tardiphaga sp. Vaf-05, Tardiphaga sp. Vaf-06, Tardiphaga sp. Vaf-07, Tardiphaga sp. Vaf-27, Tardiphaga sp. Vaf-28, Tardiphaga sp. Vaf-71, Tardiphaga sp. Vaf-76, Tardiphaga sp. Vaf-91, Tardiphaga sp. Vaf-93, strain R-45977
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.