STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mnmGtRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; Functional Classification (COG): Cell division and chromosome partitioning; Predicted KEGG Orthology: K03495. (617 aa)    
Predicted Functional Partners:
mnmE
tRNA modification GTPase mnmE; Functional Classification (COG): General function prediction only; Predicted KEGG Orthology: K03650.
 
 0.997
mnmA
tRNA-specific 2-thiouridylase MnmA; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K00566.
  
 0.901
rlmH
Ribosomal RNA large subunit methyltransferase H; Functional Classification (COG): Function unknown; Predicted KEGG Orthology: K00783.
  
  
 0.882
gidB
Methyltransferase GidB (Glucose inhibiteddivision protein B); Functional Classification (COG): Cell envelope biogenesis, outer membrane; Predicted KEGG Orthology: K03501.
  
  
 0.871
apt
Adenine phosphoribosyltransferase; Functional Classification (COG): Nucleotide transport and metabolism; Predicted KEGG Orthology: K00759.
      0.840
tilS
tRNA(Ile)-lysidine synthase; Functional Classification (COG): Cell division and chromosome partitioning; Predicted KEGG Orthology: K04075.
  
  
 0.731
truB
tRNA pseudouridine synthase B; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K03177.
   
  
 0.700
topA
DNA topoisomerase; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K03168.
  
  
 0.677
ADV34076.1
Hypothetical Protein.
       0.664
thiI
Probable thiamine biosynthesis protein ThiI; Functional Classification (COG): Coenzyme metabolism; Predicted KEGG Orthology: K03151.
  
  
 0.659
Your Current Organism:
Mycoplasma fermentans
NCBI taxonomy Id: 943945
Other names: M. fermentans M64, Mycoplasma fermentans M64, Mycoplasma fermentans str. M64, Mycoplasma fermentans strain M64
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