STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aptAdenine phosphoribosyltransferase; Functional Classification (COG): Nucleotide transport and metabolism; Predicted KEGG Orthology: K00759. (171 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase; Functional Classification (COG): Nucleotide transport and metabolism; Predicted KEGG Orthology: K00942.
  
 
 0.982
hpt
Hypoxanthine phosphoribosyltransferase; Functional Classification (COG): Nucleotide transport and metabolism; Predicted KEGG Orthology: K00760.
   
 0.953
adk
Adenylate kinase; Functional Classification (COG): Nucleotide transport and metabolism; Predicted KEGG Orthology: K00939.
  
 
 0.940
deoD-2
Purine-nucleoside phosphorylase; Functional Classification (COG): Nucleotide transport and metabolism; Predicted KEGG Orthology: K03784.
    
 0.935
deoD-1
Purine-nucleoside phosphorylase; Functional Classification (COG): Nucleotide transport and metabolism; Predicted KEGG Orthology: K03784.
    
 0.914
deoD-3
Purine-nucleoside phosphorylase; Functional Classification (COG): Nucleotide transport and metabolism.
    
 0.914
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; Functional Classification (COG): Cell division and chromosome partitioning; Predicted KEGG Orthology: K03495.
      0.840
infB
Translation initiation factor IF-2; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K02519.
  
    0.753
nusA
N-utilization substance protein A; Functional Classification (COG): Transcription; Predicted KEGG Orthology: K02600.
  
    0.748
ADV34083.1
Conserved Hypothetical Protein; Functional Classification (COG): Transcription; Predicted KEGG Orthology: K07742; pfam04296, DUF448, Protein of unknown function (DUF448).
  
    0.748
Your Current Organism:
Mycoplasma fermentans
NCBI taxonomy Id: 943945
Other names: M. fermentans M64, Mycoplasma fermentans M64, Mycoplasma fermentans str. M64, Mycoplasma fermentans strain M64
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