STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV34121.1Hypothetical Protein. (125 aa)    
Predicted Functional Partners:
ADV34122.1
Hypothetical Protein.
       0.773
trsE-1
TrsE-like protein; Functional Classification (COG): Intracellular trafficking and secretion.
       0.773
ADV34120.1
Hypothetical Protein.
       0.697
ADV34124.1
Hypothetical Protein.
       0.636
ADV34117.1
Conserved Hypothetical Protein.
       0.472
ADV34118.1
Conserved Hypothetical Protein.
       0.472
ADV34119.1
Hypothetical Protein.
       0.472
ADV34125.1
Conserved Hypothetical Protein.
       0.470
ADV34116.1
Hypothetical Protein.
       0.441
ruvB-1
Holliday junction ATP-dependent DNA helicase RuvB; Functional Classification (COG): DNA replication, recombination, and repair.
       0.401
Your Current Organism:
Mycoplasma fermentans
NCBI taxonomy Id: 943945
Other names: M. fermentans M64, Mycoplasma fermentans M64, Mycoplasma fermentans str. M64, Mycoplasma fermentans strain M64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.