STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parCTopoisomerase IV subunit A; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K02621. (856 aa)    
Predicted Functional Partners:
parE
Topoisomerase IV subunit B; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K02622.
 0.996
gyrB
DNA gyrase subunit B; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K02470.
 0.984
metS
Methionyl-tRNA synthetase; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K01874.
  
  
 0.697
polA
DNA polymerase I; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K02335.
 
  
 0.637
gyrA
Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K02469.
  
  
0.616
dnaK
Chaperone protein DnaK; Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; Predicted KEGG Orthology: K04043.
   
 
 0.582
ADV34131.1
Predicted phosphoesterase; Functional Classification (COG): General function prediction only; Predicted KEGG Orthology: K07095.
  
    0.569
secD
Protein-export membrane protein; Functional Classification (COG): Intracellular trafficking and secretion; Predicted KEGG Orthology: K12257.
  
  
 0.567
nusA
N-utilization substance protein A; Functional Classification (COG): Transcription; Predicted KEGG Orthology: K02600.
 
  
 0.528
ftsZ
Functional Classification (COG): Cell division and chromosome partitioning; Predicted KEGG Orthology: K03531.
   
 
 0.518
Your Current Organism:
Mycoplasma fermentans
NCBI taxonomy Id: 943945
Other names: M. fermentans M64, Mycoplasma fermentans M64, Mycoplasma fermentans str. M64, Mycoplasma fermentans strain M64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.