STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
damAdenine-specific DNA methyltransferase; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K06223. (379 aa)    
Predicted Functional Partners:
dpnII
Type II restriction enzyme DpnII; Predicted KEGG Orthology: K01155.
   
 0.988
recG
ATP-dependent DNA helicase; Functional Classification (COG): Transcription.
       0.773
recD
Exodeoxyribonuclease V, alpha subunit; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K03581.
     
 0.596
hsdM
Type I restriction-modification system, M subunit; Functional Classification (COG): Defense mechanisms; Predicted KEGG Orthology: K03427.
     
 0.584
chrA-2
Putative Chromate transport protein; Functional Classification (COG): Inorganic ion transport and metabolism; Predicted KEGG Orthology: K07240.
     
 0.583
pepF
Functional Classification (COG): Amino acid transport and metabolism; Predicted KEGG Orthology: K08602.
       0.572
hsdR
Type I restriction-modification system, R subunit; Functional Classification (COG): Defense mechanisms; Predicted KEGG Orthology: K01153.
     
 0.562
trpS
Tryptophanyl-tRNA synthetase; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K01867.
 
    0.531
abiGII
Abortive infection protein AbiGII.
      
 0.530
ADV34030.1
Cytosine-specific methyltransferase; Predicted KEGG Orthology: K00558.
     
 0.460
Your Current Organism:
Mycoplasma fermentans
NCBI taxonomy Id: 943945
Other names: M. fermentans M64, Mycoplasma fermentans M64, Mycoplasma fermentans str. M64, Mycoplasma fermentans strain M64
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.