STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prfAPeptide chain release factor 1; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K02835. (358 aa)    
Predicted Functional Partners:
hemK
Protoporphyrinogen oxidase; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K02493.
 
 
 0.996
rplQ
50S ribosomal protein L17; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K02879.
 
 
 0.972
rplC
50S ribosomal protein L3; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K02906.
  
 
 0.970
rplI
50S ribosomal protein L9; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K02939.
   
 
 0.970
rplD
Putative 50S ribosomal protein L4; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K02926.
 
 
 0.969
rpmA
Putative 50S ribosomal protein L27; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K02899.
  
 
 0.969
rpsL
30S ribosomal protein S12; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K02950.
  
 
 0.969
rplS
50S ribosomal protein L19; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K02884.
  
 
 0.967
rplM
50S ribosomal protein L13; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K02871.
 
 
 0.967
rplT
50S ribosomal protein L20; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K02887.
  
 
 0.967
Your Current Organism:
Mycoplasma fermentans
NCBI taxonomy Id: 943945
Other names: M. fermentans M64, Mycoplasma fermentans M64, Mycoplasma fermentans str. M64, Mycoplasma fermentans strain M64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.