STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaXDNA polymerase III subunits gamma and tau; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K02343. (604 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III beta subunit; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K02338.
   
 0.999
holA
DNA polymerase III delta subunit; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K02340.
   
 0.999
dnaE
DNA polymerase III alpha subunit; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K02337.
 
 0.996
holB
DNA polymerase III subunit delta; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K02341.
 
  
 
0.974
polC
DNA polymerase III alpha subunit; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K03763.
  
 0.947
tmk
Thymidylate kinase; Functional Classification (COG): Nucleotide transport and metabolism; Predicted KEGG Orthology: K00943.
 
  
 0.868
recR
Recombination protein RecR; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K06187.
 
  
 0.855
ssb
Single-stranded DNA-binding protein; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K03111.
   
 0.833
ADV34384.1
Putative Single-stranded DNA-binding protein; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K03111.
   
 0.833
ADV34452.1
Putative Single-stranded DNA-binding protein; Functional Classification (COG): DNA replication, recombination, and repair; Predicted KEGG Orthology: K03111.
   
 0.833
Your Current Organism:
Mycoplasma fermentans
NCBI taxonomy Id: 943945
Other names: M. fermentans M64, Mycoplasma fermentans M64, Mycoplasma fermentans str. M64, Mycoplasma fermentans strain M64
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