STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744435_00240Unannotated protein. (319 aa)    
Predicted Functional Partners:
GCA_000744435_00239
Unannotated protein.
 
 0.999
GCA_000744435_01731
Unannotated protein.
  
  
 0.928
GCA_000744435_00245
Unannotated protein.
 
     0.828
GCA_000744435_00243
Unannotated protein.
     
 0.808
GCA_000744435_00242
Unannotated protein.
  
    0.806
GCA_000744435_00244
Unannotated protein.
       0.806
GCA_000744435_00241
Unannotated protein.
       0.783
GCA_000744435_00246
Unannotated protein.
       0.783
GCA_000744435_00237
Unannotated protein.
     
 0.716
GCA_000744435_00238
Unannotated protein.
     
 0.713
Your Current Organism:
Hippea jasoniae
NCBI taxonomy Id: 944479
Other names: DSM 24585, H. jasoniae, Hippea jasoniae Flores et al. 2012, Hippea sp. Mar08-272r, OCM 985, strain Mar08-272r
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.