STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744435_01198Unannotated protein. (334 aa)    
Predicted Functional Partners:
GCA_000744435_01197
Unannotated protein.
   
 0.964
GCA_000744435_00793
Unannotated protein.
 
 0.930
GCA_000744435_00529
Unannotated protein.
 
 
 0.913
GCA_000744435_01020
Unannotated protein.
  
  
 0.812
GCA_000744435_01550
Unannotated protein.
 
  
 0.810
GCA_000744435_01199
Unannotated protein.
       0.806
GCA_000744435_00531
Unannotated protein.
 
  
 0.706
GCA_000744435_00935
Unannotated protein.
  
    0.690
GCA_000744435_01583
Unannotated protein.
  
    0.690
GCA_000744435_00112
Unannotated protein.
   
    0.666
Your Current Organism:
Hippea jasoniae
NCBI taxonomy Id: 944479
Other names: DSM 24585, H. jasoniae, Hippea jasoniae Flores et al. 2012, Hippea sp. Mar08-272r, OCM 985, strain Mar08-272r
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.